8 packages found

hail

Scalable library for exploring and analyzing genomic data.
  1. bioinformatics
  2. genetics
  3. genomics
  4. gwas
  5. hail
  6. python
  7. software
  8. vcf
81 Contributors
0.2.134published 2 months agoMIT

file-type

Detect the file type of a file, stream, or data
  1. mime
  2. file
  3. type
  4. magic
  5. archive
  6. image
  7. img
  8. pic
  9. picture
  10. flash
  11. photo
  12. video
  13. detect
  14. check
  15. is
  16. exif
  17. elf
  18. macho
  19. exe
  20. binary
  21. buffer
  22. uint8array
  23. jpg
  24. png
  25. apng
  26. gif
  27. webp
  28. flif
  29. xcf
  30. cr2
  31. cr3
  32. orf
  33. arw
  34. dng
  35. nef
  36. rw2
  37. raf
  38. tif
  39. bmp
  40. icns
  41. jxr
  42. psd
  43. indd
  44. zip
  45. tar
  46. rar
  47. gz
  48. bz2
  49. 7z
  50. dmg
  51. mp4
  52. mid
  53. mkv
  54. webm
  55. mov
  56. avi
  57. mpg
  58. mp2
  59. mp3
  60. m4a
  61. ogg
  62. opus
  63. flac
  64. wav
  65. amr
  66. pdf
  67. epub
  68. mobi
  69. swf
  70. rtf
  71. woff
  72. woff2
  73. eot
  74. ttf
  75. otf
  76. ttc
  77. ico
  78. flv
  79. ps
  80. xz
  81. sqlite
  82. xpi
  83. cab
  84. deb
  85. ar
  86. rpm
  87. Z
  88. lz
  89. cfb
  90. mxf
  91. mts
  92. wasm
  93. webassembly
  94. blend
  95. bpg
  96. docx
  97. pptx
  98. xlsx
  99. 3gp
  100. j2c
  101. jp2
  102. jpm
  103. jpx
  104. mj2
  105. aif
  106. odt
  107. ods
  108. odp
  109. xml
  110. heic
  111. ics
  112. glb
  113. pcap
  114. dsf
  115. lnk
  116. alias
  117. voc
  118. ac3
  119. 3g2
  120. m4b
  121. m4p
  122. m4v
  123. f4a
  124. f4b
  125. f4p
  126. f4v
  127. mie
  128. qcp
  129. asf
  130. ogv
  131. ogm
  132. oga
  133. spx
  134. ogx
  135. ape
  136. wv
  137. cur
  138. nes
  139. crx
  140. ktx
  141. dcm
  142. mpc
  143. arrow
  144. shp
  145. aac
  146. mp1
  147. it
  148. s3m
  149. xm
  150. ai
  151. skp
  152. avif
  153. eps
  154. lzh
  155. pgp
  156. asar
  157. stl
  158. chm
  159. 3mf
  160. zst
  161. jxl
  162. vcf
  163. jls
  164. pst
  165. dwg
  166. parquet
  167. class
  168. arj
  169. cpio
  170. ace
  171. avro
  172. icc
  173. fbx
  174. vsdx
  175. vtt
  176. apk
  177. drc
  178. lz4
  179. potx
  180. xltx
  181. dotx
  182. xltm
  183. ots
  184. odg
  185. otg
  186. otp
  187. ott
  188. xlsm
  189. docm
  190. dotm
  191. potm
  192. pptm
  193. jar
  194. rm
  195. ppsm
  196. ppsx
  197. file-types
  198. javascript
  199. magic-numbers
  200. nodejs
114 Contributors
20.5.0published 2 days agoMIT

com.github.samtools:htsjdk

A Java API for high-throughput sequencing data (HTS) formats
  1. bam
  2. cram
  3. dna
  4. fasta
  5. genomics
  6. java
  7. java-api
  8. ngs
  9. sam
  10. sequencing
  11. vcf
124 Contributors
4.2.0published 2 weeks agoMIT

snps

tools for reading, writing, merging, and remapping SNPs
  1. snps
  2. dna
  3. chromosomes
  4. bioinformatics
  5. vcf
11 Contributors
2.10.0published 1 month agoBSD-1-Clause

vcfpy

Python 3 VCF library with good support for both reading and writing
  1. vcfpy
  2. bioinformatics
  3. file-format
  4. parsing
  5. vcf
  6. writing
6 Contributors
0.13.8published 1 year agoMIT

cyvcf2

fast vcf parsing with cython + htslib
  1. bioinformatics
  2. cython
  3. genomics
  4. htslib
  5. vcf
38 Contributors
0.31.1published 10 months agoMIT

vembrane

Filter VCF/BCF files with Python expressions.
  1. bioinformatics
  2. filter
  3. filter-expression
  4. vcf
  5. vcf-filtering
8 Contributors
1.0.7published 7 months agoMIT

vobject

A full-featured Python package for parsing and creating iCalendar and vCard files
  1. vobject
  2. icalendar
  3. vcard
  4. ics
  5. vcs
  6. hcalendar
  7. caldav
  8. carddav
  9. vcalendar
  10. vcard-parser
  11. vcf
  12. vcf-files
25 Contributors
0.9.9published 4 months agoApache-2.0
Showing 1 to 8 of 8 results